| 0 | - | cover | 1 | pencils: Rodolfo Migliari; inks: Rodolfo Migliari; colors: Rodolfo Migliari | Samantha Argent |
| 1 | "In the mid-20th century, Western science developed PROJECT: USA -- "Ultra-Sapien Alliance"-- and it changed the world." | foreword, introduction, preface, afterword | 1 | letters: typeset | |
| 2 | The Story behind the Story behind the Story | foreword, introduction, preface, afterword | 2 | script: Mark Waid | |
| 3 | Ellis | character profile | 2 | pencils: Keu Cha; inks: Keu Cha; colors: Keu Cha | Ellis |
| 4 | Wolf | character profile | 2 | pencils: Marc Silvestri; inks: Joe B. Weems V; colors: John Starr | Wolf |
| 5 | Samantha Argent | character profile | 2 | pencils: J. G. Jones; inks: J. G. Jones; colors: Blond | Samantha Argent |
| 6 | Ellis' Parents | character profile | 2 | pencils: Tom Mandrake; inks: Tom Mandrake; colors: John Starr | Susan (Ellis' mother); Steve (Ellis' father) |
| 7 | Morningstar | character profile | 2 | pencils: Mark Millar; inks: Joe B. Weems V; colors: Blond | Morningstar |
| 8 | Samantha's Soldiers | character profile | 2 | pencils: Eric Basaldua; inks: Rick Basaldua; colors: Chad Fidler | |
| 9 | Architect & Damper | character profile | 2 | pencils: Mike Deodato Jr.; inks: Mike Deodato Jr.; colors: Blond | Architect; Damper |
| 10 | Transporter | character profile | 2 | pencils: Bill Sienkiewicz; inks: Bill Sienkiewicz; colors: John Starr | Transporter |
| 11 | Network | character profile | 2 | pencils: Cully Hamner; inks: Cully Hamner; colors: Cully Hamner | Network |
| 12 | Cloaker | character profile | 2 | pencils: Tyler Kirkham; inks: Aaron Sowd; colors: John Starr | Cloaker |
| 13 | Cathy Cthulu | character profile | 2 | pencils: Mike Choi; inks: Mike Choi; colors: John Starr | Cathy Cthulu |
| 14 | Tessa Em | character profile | 2 | pencils: Humberto Ramos; inks: Joe B. Weems V; colors: John Starr | Tessa Em |