| 0 | - | cover | 1 | pencils: JonBoy Meyers; inks: JonBoy Meyers; colors: Anthony Washington | Wild Weasel |
| 1 | - | blank page(s) | 1 | | |
| 2 | - | foreword, introduction, preface, afterword | 1 | | Storm Shadow |
| 3 | - | credits, title page | 1 | letters: typeset | |
| 4 | - | cover reprint (on interior page) | 1 | pencils: Lee Weeks; inks: Lee Weeks | Snake-Eyes; Storm Shadow; Scarlett; Jinx |
| 5 | Probe And Feint! | comic story | 20 | script: Larry Hama; pencils: John Statema; inks: Randy Emberlin; colors: Bob Sharen; letters: Rick Parker | G.I. Joe [Flint; Lady Jaye; Dusty; Roadblock; Armadillo; Hawk; Dogfight; Lift-Ticket; Wild Bill; Snake-Eyes; Storm Shadow; Scarlett; Jinx; Cool Breeze (introduction); Sneak-Peek; Stalker; Ambush; Recoil; Psyche-Out]; Cobra [Cobra Commander; SAW-Viper; Tomax; Xamot; Night Creepers; Viper troopers; Ni |
| 6 | In This Issue: Ninja Fighting! The War Continues! And The Body Count Rises... | cover reprint (on interior page) | 1 | pencils: Lee Weeks; inks: Lee Weeks | |
| 7 | Who's the Hero? | comic story | 22 | script: Larry Hama; pencils: John Statema; inks: Randy Emberlin; colors: Bob Sharen; letters: Rick Parker | G.I. Joe [Hawk; Flint (captured by anti-Emirate rebels); Lady Jaye (captured by anti-Emirate rebels); Cross Country (cameo); Stalker; Cool Breeze (death); Ambush; Recoil; Sneak Peek; Scarlett; Snake-Eyes; Jinx; Storm Shadow]; Cobra [Cobra Commander; Tomax; Xamot; Tele-Vipers; Viper Troopers; SAW-Vip |
| 8 | Inside: The War Continues! The Death of Battle Force 2000 ? | cover reprint (on interior page) | 1 | pencils: Andy Kubert; inks: Andy Kubert | G.I. Joe [Roadblock; Muskrat; Tunnel Rat]; Alley Vipers |
| 9 | Previous Agreement | comic story | 20 | script: Larry Hama; pencils: John Statema; inks: Randy Emberlin; colors: Bob Sharen; letters: Rick Parker | G.I. Joe [Stalker; Dusty; Sneak Peek (death); Hawk; Dial-Tone; Lady Jaye; Tunnel Rat; Roadblock; Muskrat; Recoil; Ambush; Stretcher; Battle Force 2000 [Dodger; Avalanche; Blocker; Blaster; Knockdown; Maverick; Dee-Jay (all on Battle Force 2000 team die except for Dodger)]]; Cobra [Cobra Commander; F |
| 10 | Introducing Metal-Head! | cover reprint (on interior page) | 1 | pencils: Andy Kubert; inks: Andy Kubert | G.I. Joe [Rock N Roll; Dusty; Salvo] |
| 11 | Metal-Head! | comic story | 20 | script: Larry Hama; pencils: John Statema; inks: Randy Emberlin; colors: Bob Sharen; letters: Rick Parker | G.I. Joe [Salvo; Rock N Roll; Dusty; Hot Seat; Steeler]; Cobra [Cobra Commander; Techno-Vipers; Toxo-Viper (mark one); Viper troopers; Night Creepers; Iron Grenadiers [Metal-Head (introduction)]]; Emirate of Benzheen; Emirate Bodyguards |
| 12 | - | cover reprint (on interior page) | 1 | pencils: Ron Wagner; inks: Ron Wagner | Captain Jeffries [Ghost Rider]; Slipstream |
| 13 | Counting Coup ! | comic story | 20 | script: Larry Hama; pencils: John Statema; inks: Randy Emberlin; colors: Bob Sharen; letters: Rick Parker | G.I. Joe [Hawk; Ace; Dogfight; Lady Jaye; Keel-Haul; Captain Jeffries [Ghost Rider]; Slipstream; Backblast; Rampart; Mainframe]; Cobra [Cobra Commander; Wild Weasel; Techno-Vipers; Tele-Vipers; Night Creepers; Vapor pilots; Aero-Viper pilots]; Emirate of Benzheen |
| 14 | Destro: Search And Destroy! (Part 1 of 3) | cover reprint (on interior page) | 1 | pencils: Michael Golden; inks: Michael Golden | Destro (in front of Destro: Wanted... poster) |
| 15 | Destro Must Die! | comic story | 20 | script: Larry Hama; pencils: Rod Whigham; inks: Randy Emberlin; colors: Bob Sharen; letters: Rick Parker | G.I. Joe [Hawk; Flint; Big Ben; Snake-Eyes; Lift-Ticket; Lowlight; Chuckles]; Cobra [Cobra Commander; Tomax; Xamot; Aero-Vipers; Tele-Vipers; Techno-Vipers; H.E.A.T-Viper; Toxo-Vipers (mark one); Crimson Guard (mark two); Viper troopers]; Iron Grenadiers [Destro (leader); Baroness (ally); Metal-Head |
| 16 | Destro: Search and Destroy! (Part 2 of 3) | cover reprint (on interior page) | 1 | pencils: Michael Golden; inks: Michael Golden | Destro; Baroness; Flint; Lady Jaye; Snake-Eyes; Night Vipers |
| 17 | Escape From Castle Destro! | comic story | 20 | script: Larry Hama; pencils: Rod Whigham; inks: Randy Emberlin; colors: Bob Sharen; letters: Rick Parker | G.I. Joe [Hawk; Snake-Eyes; Storm Shadow; Chuckles; Flint; Lady Jaye; Lowlight; Lift-Ticket; Big Ben; Ninja Force [Nunchuk; Dojo; T'Jbang (introductions)]]; Cobra [Cobra Commander; Tele-Vipers; Night Creepers; Viper troopers; Alley Vipers]; Destro; Billy; Zartan; Baroness (captured by Cobra) |
| 18 | Destro: Search And Destroy! Part 3 of 3 | cover reprint (on interior page) | 1 | pencils: Michael Golden; inks: Michael Golden | Destro; Cobra Commander |
| 19 | Deceptions & Diversions! | comic story | 20 | script: Larry Hama; pencils: Rod Whigham; inks: Randy Emberlin; colors: Bob Sharen; letters: Mike Heisler | G.I. Joe [Chuckles; Ninja Force [Snake-Eyes (leader); Storm Shadow; Nunchuk; Dojo; T'Jbang]]; Cobra [Cobra Commander; Night Creepers; Tele-Vipers; Viper troopers]; Billy; Zartan; Baroness (Cobra captive); Destro; Rashid |
| 20 | Snake-Eyes vs. Snake-Eyes??? | cover reprint (on interior page) | 1 | pencils: Herb Trimpe; inks: Herb Trimpe | G.I Joe [Snake-Eyes; Scarlett; Storm Shadow]; evil Snake-Eyes duplicate |
| 21 | Double Trouble | comic story | 22 | script: Herb Trimpe; pencils: Herb Trimpe; inks: Herb Trimpe; colors: Herb Trimpe; letters: Rick Parker | G.I. Joe [Snake-Eyes; Hawk; Scarlett; Storm Shadow; Wild Bill; Ghost Rider (mentioned as 'stealth pilot')]; Cobra [Cobra Commander; Viper troopers; E.C.H.O. [Enhanced Copy, Human Original] robots of various then-current world leaders and famous persons; loadmaster (only appearance; killed)]; airfiel |
| 22 | At The Mercy of The Red Ninjas! | cover reprint (on interior page) | 1 | pencils: Andrew Wildman; inks: Andrew Wildman | Destro; Baroness; Cobra Red Ninjas |
| 23 | Return To The Silent Castle! | comic story | 20 | script: Larry Hama; pencils: Andrew Wildman; inks: Randy Emberlin; colors: Bob Sharen; letters: Rick Parker | G.I.Joe [Hawk; Stalker; Dusty; Ninja Force [Snake-Eyes; Storm Shadow; Nunchuk; Dojo; T'Jbang] Flint; Lady Jaye]; Cobra [Cobra Commander (first appearance, new battle armor); Ninja Force [Slice; Dice]; Aero-Viper; Night Creepers; Viper troopers; Red Ninjas]; Destro; Baroness |
| 24 | - | illustration | 1 | | |
| 25 | To Save The Silent Castle! | cover reprint (on interior page) | 1 | pencils: Andrew Wildman; inks: Andrew Wildman | G.I.Joe [Ninja Force [Snake-Eyes; Storm Shadow; Dojo; Nunchuk; T'Jbang]] |
| 26 | Slice & Dice & Everything Nice | comic story | 20 | script: Larry Hama; pencils: Andrew Wildman; inks: Randy Emberlin; colors: Bob Sharen; letters: Rick Parker | G.I.Joe [Hawk; Flint; Lady Jaye; Stalker; Roadblock; Rock 'n Roll; Dusty; Big Ben]; Destro; Baroness; Cobra [Ninja Force [Slice; Dice]; Red Ninjas; Frag-Viper; HEAT (High Explosive Anti-Tank)-Viper; Night Viper; Toxo-Viper II; Tele-Viper; SAW (Semi-Auto Weapon)-Viper] |
| 27 | The Ninja Wars | cover reprint (on interior page) | 1 | pencils: Andrew Wildman; inks: Andrew Wildman | Slice; Storm Shadow |
| 28 | Transformer! | comic story | 20 | script: Larry Hama; pencils: Andrew Wildman; inks: Randy Emberlin; colors: Bob Sharen; letters: Rick Parker | G.I.Joe [Hawk; Roadblock; Rock 'N Roll; Ambush; Stalker; Dusty; Flint; Lady Jaye; Big Ben; Ninja Force [Snake-Eyes; Storm Shadow; Nunchuk; T'Jbang; Dojo]]; Cobra [Ninja Force [Slice; Dice]; Red Ninjas; Tele-Viper; Night Viper; Toxo-Viper II; Saw-Viper; Heat-Viper; Frag-Viper; Cobra Commander (first |
| 29 | The Secret Of The Sludge | cover reprint (on interior page) | 1 | pencils: Andrew Wildman; inks: Andrew Wildman | Cobra Commander |
| 30 | Shots In The Dark! | comic story | 20 | script: Larry Hama; pencils: Andrew Wildman; inks: Randy Emberlin; colors: Bob Sharen; letters: Rick Parker | G.I. Joe [Hawk; Roadblock; Dusty; Lady Jaye; Big Ben; Rock N Roll; Stalker; Duke; Wild Bill; Eco-Warriors [Flint (Leader); Ozone (first appearance); Clean-Sweep (first appearance)]; Ninja Force [Snake-Eyes (leader); Storm Shadow; Nunchuk; Dojo; T'Jbang]]; Cobra [Cobra Commander; Zarana; SAW-Viper; T |
| 31 | - | blank page(s) | 1 | | |
| 32 | - | foreword, introduction, preface, afterword | 1 | pencils: various; inks: various; letters: typeset | |