| 0 | - | cover | 0 | pencils: Tony Harris; inks: Tony Harris; colors: JD Mettler | |
| 1 | Chapter 1 Smoke Smoke | credits, title page | 1 | | |
| 2 | Part One | comic story | 22 | script: Brian K. Vaughan; pencils: Tony Harris; inks: Tom Feister; colors: JD Mettler; letters: Jared K. Fletcher | Mitchell Hundred (also in April 2001 flashback); David Wylie; January Moore; Bradbury |
| 3 | Part Two | comic story | 21 | script: Brian K. Vaughan; pencils: Tony Harris; inks: Tom Feister; colors: JD Mettler; letters: Jared K. Fletcher | Mitchell Hundred; Bradbury; Todd Wylie; Dave Wylie; Candy; January Moore |
| 4 | - | cover reprint (on interior page) | 1 | pencils: Tony Harris; inks: Tony Harris; colors: Tony Harris | |
| 5 | Part Three | comic story | 22 | script: Brian K. Vaughan; pencils: Tony Harris; inks: Tom Feister; colors: JD Mettler; letters: Jared K. Fletcher | |
| 6 | Part Four | comic story | 22 | script: Brian K. Vaughan; pencils: Tony Harris; inks: Tom Feister; colors: JD Mettler; letters: Jared K. Fletcher | Mitchell Hundred (also in April 2001 flashback); Bradbury (also in flashback); Kremlin (in flashback); January Moore; Candy; Amy Angotti; David Wylie; Kremlin |
| 7 | Chapter 2 Stand Alone | credits, title page | 1 | | |
| 8 | - | comic story | 22 | script: Brian K. Vaughan; pencils: Tony Harris; inks: Tom Feister; colors: JD Mettler; letters: Jared K. Fletcher | Bradbury (also in flashback); Mitchell Hundred (flashback); Kremlin (flashback) |
| 9 | Chapter 3 Power Down | credits, title page | 1 | | |
| 10 | Part One | comic story | 22 | script: Brian K. Vaughan; pencils: Tony Harris; inks: Jim Clark; colors: JD Mettler; letters: Jared K. Fletcher | Mitchell Hundred (also in September 2001 flashback); Candy; David Wylie; January Moore; Bradbury; Martha Hundred; Kremlin |
| 11 | - | cover reprint (on interior page) | 1 | pencils: Tony Harris; inks: Tony Harris; colors: Tony Harris | |
| 12 | Part Two | comic story | 22 | script: Brian K. Vaughan; pencils: Tony Harris; inks: Jim Clark; colors: JD Mettler; letters: Jared K. Fletcher | Mitchell Hundred (also in 1977 flashback); Martha Hundred (also in 1977 flashback); Bradbury; Zeller; Candy; Kremlin; David Wylie; Nolita Cemac (introduction) |
| 13 | Part Three | comic story | 22 | script: Brian K. Vaughan; pencils: Tony Harris; inks: Jim Clark; colors: JD Mettler; letters: Jared K. Fletcher | Mitchell Hundred (also in March 2000 flashback); Martha Hundred; Bradbury (also in March 2000 flashback); Zeller; Candy; Kremlin (also in March 2000 flashback); Nolita Cemac |
| 14 | Part Four | comic story | 22 | script: Brian K. Vaughan; pencils: Tony Harris; inks: Jim Clark; colors: JD Mettler; letters: Jared K. Fletcher | Mitchell Hundred (also in September 2001 flashback); Martha Hundred; Bradbury (also in September 2001 flashback); Zeller; Kremlin; January Moore; David Wylie; Lilith Warren |
| 15 | Chapter 4 Masquerade | credits, title page | 1 | | |
| 16 | Masquerade | comic story | 32 | script: Brian K. Vaughan; pencils: John Paul Leon; inks: John Paul Leon; colors: JD Mettler; letters: Jared K. Fletcher | Mitchell Hundred (also in flashback to October 1999); Candy; David Wylie; Bradbury (in flashback to October 1999); Kremlin (in flashback to October 1999) |
| 17 | Chapter 5 Inside the Machine | credits, title page | 1 | | |
| 18 | Introduction by Brian K. Vaughan | foreword, introduction, preface, afterword | 1 | script: Brian K. Vaughan; pencils: Tony Harris; inks: Jim Clark; colors: J. D. Mettler | |
| 19 | Inside Progress: Interior Page Showcase | comic story | 7 | script: Brian K. Vaughan; pencils: Tony Harris; inks: Jim Clark; colors: J. D. Mettler; letters: Jared K. Fletcher | |
| 20 | Inside the Covers | illustration | 10 | script: Tony Harris; pencils: Tony Harris, Tony Harris; inks: Tony Harris, Tony Harris | |
| 21 | Ex Machina: Concepts & Photos | text article | 3 | script: Tony Harris; pencils: Tony Harris, Tony Harris; inks: Tony Harris, Tony Harris | |
| 22 | Afterword by Tony Harris | foreword, introduction, preface, afterword | 1 | script: Tony Harris | Tony Harris (photograph) |
| 23 | A Note from the Editor | text article | 11 | script: Brian K. Vaughan; pencils: John Paul Leon; inks: John Paul Leon | |