| 0 | - | cover | 1 | pencils: Jae Lee; inks: Jae Lee; colors: June Chung | Batman [Bruce Wayne]; Hush; Penguin; Deadshot; Scarface |
| 1 | - | cover reprint (on interior page) | 1 | pencils: Tim Sale; inks: Tim Sale; colors: Mark Chiarello | Batman [Bruce Wayne]; Batgirl [Cassandra Cain] |
| 2 | Scarification | comic story | 22 | script: Andersen Gabrych; pencils: Pete Woods; inks: Cam Smith; colors: Jason Wright; letters: Clem Robins | Batman [Bruce Wayne]; Batgirl [Cassandra Cain]; Debra Ann Farrow; Betty Lisecki; Derek; Oracle [Barbara Gordon]; Stanley |
| 3 | - | cover reprint (on interior page) | 1 | pencils: Tim Sale; inks: Tim Sale; colors: Mark Chiarello | |
| 4 | The Surrogate, Part One: Lost and Found | comic story | 22 | script: Andersen Gabrych; pencils: Pete Woods; inks: Cam Smith; colors: Jason Wright; letters: Clem Robins | Batman; Dr. Leslie Thompkins |
| 5 | - | cover reprint (on interior page) | 1 | pencils: Tim Sale; inks: Tim Sale; colors: Mark Chiarello | Batman |
| 6 | The Surrogate, Part Two: The Blinding | comic story | 22 | script: Andersen Gabrych; pencils: Pete Woods; inks: Cam Smith; colors: Jason Wright; letters: Clem Robins | Batman; Dr. Leslie Thompkins; Mr. Freeze |
| 7 | - | cover reprint (on interior page) | 1 | pencils: Tim Sale; inks: Tim Sale; colors: Mark Chiarello | Batman; Mr. Freeze |
| 8 | The Surrogate, Part Three: Deliverance | comic story | 22 | script: Andersen Gabrych; pencils: Pete Woods; inks: Cam Smith; colors: Jason Wright; letters: Clem Robins | Batman [Bruce Wayne]; Dr. Leslie Thompkins; Mr. Freeze [Dr. Victor Fries]; Neisha; L'Shea; Marquis; Alfred Pennyworth |
| 9 | - | cover reprint (on interior page) | 1 | pencils: Tim Sale; inks: Tim Sale; colors: Mark Chiarello | Tarantula [Catalina Flores] |
| 10 | Monsters of Rot, Part One: Cleansing Fires | comic story | 22 | script: Andersen Gabrych; pencils: Pete Woods; inks: Cam Smith; colors: Jason Wright; letters: Clem Robins | Batman [Bruce Wayne]; Tarantula [Catalina Flores]; Orpheus [Gavin King]; L'Shea; The Murge; Commissioner Michael Akins |
| 11 | - | cover reprint (on interior page) | 1 | pencils: Tim Sale; inks: Tim Sale; colors: Mark Chiarello; letters: Todd Klein | Batman [Bruce Wayne] |
| 12 | Monsters of Rot, Part Two: Knee Deep | comic story | 22 | script: Andersen Gabrych; pencils: Pete Woods; inks: Nathan Massengill; colors: Jason Wright; letters: Clem Robins | Batman [Bruce Wayne]; Orpheus [Gavin King]; Commissioner Michael Akins; Sanitation Commissioner Francis Johnson; Tarantula [Catalina Flores]; The Murge |
| 13 | Polished Stone, Part One | comic story | 8 | script: Andersen Gabrych; pencils: Brad Walker; inks: Troy Nixey; colors: Giulia Brusco; letters: Clem Robins | Batman [Bruce Wayne]; Orpheus [Gavin King]; Onyx [Onyx Adams]; Green Arrow [Oliver Queen] |
| 14 | Polished Stone, Part Two | comic story | 8 | script: Andersen Gabrych; pencils: Brad Walker; inks: Troy Nixey; colors: Giulia Brusco; letters: Clem Robins | Batman [Bruce Wayne]; Batgirl [Cassandra Cain]; Orpheus; Onyx; Penguin (villain) |
| 15 | - | cover reprint (on interior page) | 1 | pencils: Damion Scott; inks: Damion Scott; colors: Guy Major | |
| 16 | A Life More Ordinary | comic story | 22 | script: Bill Willingham; pencils: Damion Scott; inks: Damion Scott; colors: Guy Major; letters: Phil Balsman | Darla Aquista; Batman [Bruce Wayne]; Crystal Brown; Bernard Dowd; Jack Drake; Tim Drake; Alfred Pennyworth; Robin [Stephanie Brown]; Scarab [Maat Shadid] (villain); Spoiler [Stephanie Brown]; Dana Winters-Drake |
| 17 | - | cover reprint (on interior page) | 1 | pencils: Tim Sale; inks: Tim Sale; colors: Mark Chiarello | Batman [Bruce Wayne]; Robin [Stephanie Brown]; Victor Zsasz |
| 18 | ...And Red All Over | comic story | 22 | script: Andersen Gabrych; pencils: Pete Woods; inks: Nathan Massengill; colors: Jason Wright; letters: Clem Robins | Batman; Robin [Stephanie Brown]; Oracle [Barbara Gordon]; Victor Zsasz (villain) |
| 19 | - | cover reprint (on interior page) | 1 | pencils: James Jean; inks: James Jean; colors: James Jean | Batgirl [Cassandra Cain]; Robin [Stephanie Brown]; Penguin |
| 20 | Sisterhood | comic story | 22 | script: Dylan Horrocks; pencils: Dave Ross; inks: Jesse Delperdang; colors: Jason Wright; letters: Clem Robins | Batgirl [Cassandra Cain]; Robin [Stephanie Brown]; Oracle [Barbara Gordon]; Penguin |
| 21 | - | illustration | 1 | pencils: Damion Scott; inks: Robert Campanella; colors: Tom McCraw, Digital Chameleon | Batgirl [Cassandra Cain] |
| 22 | - | foreword, introduction, preface, afterword | 1 | script: Damion Scott; pencils: Damion Scott; inks: Damion Scott; letters: Damion Scott | |
| 23 | Second Chance | comic story | 11 | script: Damion Scott, Randee Carcano; pencils: Damion Scott; inks: Brian Stelfreeze; colors: Brian Stelfreeze; letters: Nick J. Napolitano | Robin [Stephanie Brown]; Batgirl [Cassandra Cain]; Calamity |
| 24 | - | cover reprint (on interior page) | 1 | pencils: Damion Scott; inks: Damion Scott; colors: Guy Major | |
| 25 | Girl Wonder | comic story | 22 | script: Bill Willingham; pencils: Damion Scott; inks: Damion Scott, Robert Campanella; colors: Guy Major; letters: Phil Balsman | Darla Aquista; Batgirl [Cassandra Cain]; Batman [Bruce Wayne]; Crystal Brown; Bernard Dowd; Jack Drake; Tim Drake; Oracle [Barbara Gordon]; Robin [Stephanie Brown]; Scarab [Maat Shadid] (villain); Dana Winters-Drake; Tiger Moth; Tyrone (student bully); Byron (student nerd); Bloodbath, Inc. |
| 26 | - | cover reprint (on interior page) | 1 | pencils: Damion Scott; inks: Damion Scott; colors: Guy Major | |
| 27 | Fired! | comic story | 22 | script: Bill Willingham; pencils: Damion Scott; inks: Damion Scott; colors: Guy Major; letters: Phil Balsman | |
| 28 | - | cover reprint (on interior page) | 1 | pencils: Cameron Stewart; inks: Cameron Stewart; colors: Cameron Stewart | Batman [Bruce Wayne] |
| 29 | War Games Prelude: No Help | comic story | 24 | script: Devin Grayson; pencils: Ramón Bachs; inks: Raúl Fernández, Rodney Ramos; colors: Steve Buccellato; letters: Rob Leigh | Spoiler [Stephanie Brown]; Bruce Wayne [Batman]; Kobra; Pasquale Galante Jr.; Zeiss; Orpheus; Onyx; Alfred Pennyworth; Otero; Manuel Escabedo; Akahara; Dick Grayson [Robin (flashback); Nightwing]; Robin [Jason Todd]; Robin [Tim Drake]; Tarantula [Catalina Flores]; Penguin; Deadshot; Lew Moxon; Hellh |
| 30 | - | cover reprint (on interior page) | 1 | pencils: Jock; inks: Jock; colors: Jock | Batman [Bruce Wayne] |
| 31 | War Games, Act 1: Part 1, Flashpoint | comic story | 22 | script: Andersen Gabrych; pencils: Pete Woods; inks: Nathan Massengill; colors: Jason Wright; letters: Pat Brosseau | Batman [Bruce Wayne]; Orpheus; Onyx; Arturo Rodriguez (reporter); Leslie Thompkins; Batgirl [Cassandra Cain]; Diego Escabedo; Penguin; Deadshot |
| 32 | - | cover reprint (on interior page) | 1 | pencils: Brian Haberlin; inks: Brian Haberlin; colors: Brian Haberlin | Batman [Bruce Wayne] |
| 33 | War Games, Act 1: Part 2, Behind Enemy Lines | comic story | 22 | script: A. J. Lieberman; pencils: Brad Walker; inks: Troy Nixey; colors: Javier Rodríguez; letters: Jared K. Fletcher | Batman [Bruce Wayne; also as Matches Malone]; Oracle [Barbara Gordon]; Batgirl [Cassandra Cain]; Orpheus; Onyx; Penguin [Oswald Cobblepot] |
| 34 | - | cover reprint (on interior page) | 1 | pencils: Scott McDaniel; inks: Andy Owens; colors: Nathan Eyring | Nightwing [Dick Grayson] |
| 35 | War Games, Act 1: Part 3, A Sort of Homecoming | comic story | 22 | script: Devin Grayson; pencils: Mike Lilly; inks: Andy Owens; colors: Gregory Wright; letters: Rob Leigh | Nightwing; Batman; Tarantula [Catalina Flores]; Leslie Thompkins; Onyx; Tim Drake [Robin] (does not appear in costume in this issue); Jack Drake; Oracle [Barbara Gordon] |
| 36 | - | cover reprint (on interior page) | 1 | pencils: Jae Lee; inks: Jae Lee; colors: June Chung | Batman [Bruce Wayne]; Hush; Penguin; Deadshot; Scarface |
| 37 | War Games, Act 1: Part 4, Rules of Engagement | comic story | 22 | script: A. J. Lieberman; pencils: Al Barrionuevo; inks: Francis Portela; colors: Brad Anderson; letters: Clem Robins | Hush [Tommy Elliot]; Prometheus; Ventriloquist; Scarface; Black Mask; Alexandra Kosov; Henry Aquista; Suicide King; Penguin; Firefly; Eletrocutioner; Pistolera; Vicious; Lynx; Trickster; Killer Croc; Nightwing; Batgirl [Cassandra Cain]; Tarantula [Catalina Flores]; Deadshot; Batman [Bruce Wayne]; Or |
| 38 | - | cover reprint (on interior page) | 1 | pencils: Dustin Nguyen; inks: Dustin Nguyen; colors: Dustin Nguyen | Scarface; Tim Drake |
| 39 | War Games, Act 1: Part 5, Alamo High | comic story | 22 | script: Bill Willingham; pencils: Giuseppe Camuncoli; inks: Lorenzo Ruggiero; colors: Guy Major; letters: Phil Balsman | Tim Drake; Darla Aquista; Scarface; Ventriloquist; Frank Aquista; Arturo Rodriguez |
| 40 | - | cover reprint (on interior page) | 1 | pencils: James Jean; inks: James Jean; colors: James Jean | Batgirl [Cassandra Cain] |
| 41 | War Games, Act 1: Part 6, Total War | comic story | 22 | script: Dylan Horrocks; pencils: Sean Phillips; inks: Sean Phillips; colors: Jason Wright; letters: Nick J. Napolitano | Batgirl [Cassandra Cain]; Spoiler [Stephanie Brown]; Oracle [Barbara Gordon]; Batman |
| 42 | - | cover reprint (on interior page) | 1 | pencils: Paul Gulacy; inks: Jimmy Palmiotti; colors: Laurie Kronenberg | Catwoman [Selina Kyle] |
| 43 | War Games, Act 1: Part 7, Cold Hard Facts | comic story | 22 | script: Ed Brubaker; pencils: Paul Gulacy; inks: Jimmy Palmiotti; colors: Laurie Kronenberg; letters: Clem Robins | Catwoman [Selina Kyle]; Dr. Leslie Thompkins; Mister Freeze [Victor Fries]; Spoiler [Stephanie Brown]; Holly Robinson |
| 44 | - | cover reprint (on interior page) | 1 | pencils: Matt Wagner; inks: Matt Wagner; colors: Matt Wagner | Batman [Bruce Wayne] |
| 45 | War Games, Act 1: Part 8, Last Stand at Alamo High | comic story | 22 | script: Bill Willingham; pencils: Kinsun; inks: Aaron Sowd; colors: Tony Aviña; letters: Jared K. Fletcher | Batman [Bruce Wayne]; Nightwing [Dick Grayson]; Robin [Tim Drake]; Oracle [Barbara Gordon]; Batgirl [Cassandra Cain]; Darla Aquista; Arturo Rodriguez; Winona Chen; Lieutenant Martin; Kuan; Larry; Yegor Kironofski; Oleg; Marik; Bruno |