| 0 | - | cover | 1 | pencils: Stan Sakai; inks: Stan Sakai; colors: Stan Sakai | Donatello, Leonardo, Michelangelo, Miyamoto Usagi, Raphael |
| 1 | Introduction | foreword, introduction, preface, afterword | 1 | script: Peter Laird | |
| 2 | Turtle Soup and Rabbit Stew | comic story | 6 | script: Stan Sakai; pencils: Stan Sakai; inks: Stan Sakai; letters: Stan Sakai | Donatello, Leonardo, Michelangelo, Miyamoto Usagi, Raphael |
| 3 | The Crossing | comic story | 8 | script: Peter Laird; pencils: Peter Laird; inks: Peter Laird; letters: Steve Lavigne | Leonardo, Miyamoto Usagi |
| 4 | The Treaty | comic story | 10 | script: Stan Sakai; pencils: Stan Sakai; inks: Stan Sakai; letters: Stan Sakai | Donatello, Leonardo, Michelangelo, Miyamoto Usagi, April O'Neil, Raphael, Tomoe Ame |
| 5 | Shades of Green | comic story | 20 | script: Stan Sakai; pencils: Stan Sakai; inks: Stan Sakai; letters: Stan Sakai | Chizu, Donatello, Murakami Gennosuke, Leonardo, Michelangelo, Miyamoto Usagi, Raphael |
| 6 | Shades of Green: Chapter 2 | comic story | 20 | script: Stan Sakai; pencils: Stan Sakai; inks: Stan Sakai; letters: Stan Sakai | Chizu, Donatello, Murakami Gennosuke, Leonardo, Michelangelo, Miyamoto Usagi, Raphael |
| 7 | Shades of Green: Chapter 3 | comic story | 20 | script: Stan Sakai; pencils: Stan Sakai; inks: Stan Sakai; letters: Stan Sakai | Chizu, Donatello, Murakami Gennosuke, Leonardo, Michelangelo, Miyamoto Usagi, Raphael |
| 8 | Namazu or the Big Fish Story | comic story | 40 | script: Stan Sakai; pencils: Stan Sakai; inks: Stan Sakai; colors: Tom Luth; letters: Stan Sakai | |
| 9 | Namazu Story Notes | text article | 1 | script: Stan Sakai; pencils: Stan Sakai; inks: Stan Sakai | |
| 10 | Namazu Creative Process | text article | 24 | script: Stan Sakai; pencils: Stan Sakai; inks: Stan Sakai; colors: Stan Sakai | |
| 11 | - | cover reprint (on interior page) | 1 | pencils: Steve Bissette; inks: Peter Laird; colors: Kevin Eastman | Donatello, Leonardo, Michelangelo, Raphael |
| 12 | - | cover reprint (on interior page) | 1 | pencils: Stan Sakai; inks: Stan Sakai; colors: Tom Luth | Leonardo, Miyamoto Usagi |
| 13 | - | cover reprint (on interior page) | 1 | pencils: A. C. Farley; inks: A. C. Farley; colors: A. C. Farley | Donatello, Leonardo, Michelangelo, Raphael, Splinter |
| 14 | - | cover reprint (on interior page) | 1 | pencils: Stan Sakai; inks: Stan Sakai; colors: Tom Luth | Miyamoto Usagi, Murakami Gennosuke |
| 15 | - | cover reprint (on interior page) | 1 | pencils: Stan Sakai; inks: Stan Sakai; colors: Tom Luth | Leonardo, Miyamoto Usagi |
| 16 | - | cover reprint (on interior page) | 1 | pencils: Stan Sakai; inks: Stan Sakai; colors: Tom Luth | Donatello, Leonardo, Michelangelo, Miyamoto Usagi, Murakami Gennosuke, Raphael |
| 17 | - | illustration | 1 | pencils: Stan Sakai; inks: Stan Sakai | Donatello, Jei, Leonardo, Michelangelo, Miyamoto Usagi, Raphael |
| 18 | - | cover reprint (on interior page) | 1 | pencils: Stan Sakai; inks: Stan Sakai; colors: Tom Luth | Donatello, Leonardo, Michelangelo, Raphael |
| 19 | - | illustration | 1 | pencils: Stan Sakai; inks: Stan Sakai | Donatello, Leonardo, Michelangelo, Miyamoto Usagi, Raphael |
| 20 | - | cover reprint (on interior page) | 1 | pencils: Stan Sakai; inks: Stan Sakai; colors: Stan Sakai | Donatello, Leonardo, Michelangelo, Miyamoto Usagi, Raphael |
| 21 | - | cover reprint (on interior page) | 1 | pencils: Stan Sakai; inks: Stan Sakai; colors: Tom Luth | Donatello, Leonardo, Michelangelo, Miyamoto Usagi, Raphael |
| 22 | - | cover reprint (on interior page) | 1 | pencils: Stan Sakai; inks: Stan Sakai; colors: Tom Luth | Donatello, Jei, Leonardo, Michelangelo, Miyamoto Usagi, Raphael |
| 23 | - | cover reprint (on interior page) | 1 | pencils: Sergio Aragonés; inks: Sergio Aragonés; colors: Tom Luth | Donatello, Leonardo, Michelangelo, Miyamoto Usagi, Raphael |
| 24 | - | cover reprint (on interior page) | 1 | pencils: David Petersen; inks: David Petersen; colors: David Petersen | Donatello, Leonardo, Michelangelo, Miyamoto Usagi, Raphael |
| 25 | - | cover reprint (on interior page) | 1 | pencils: Kevin Eastman, Stan Sakai; inks: Kevin Eastman; colors: Tomi Varga | Donatello, Leonardo, Michelangelo, Miyamoto Usagi, Raphael |
| 26 | - | cover reprint (on interior page) | 1 | pencils: Kevin Eastman, Stan Sakai; inks: Kevin Eastman; colors: Tomi Varga | Donatello, Leonardo, Michelangelo, Miyamoto Usagi, Raphael |
| 27 | - | cover reprint (on interior page) | 2 | pencils: Kevin Eastman, Stan Sakai; inks: Kevin Eastman | Donatello, Leonardo, Michelangelo, Miyamoto Usagi, Raphael |
| 28 | - | cover reprint (on interior page) | 2 | pencils: Kevin Eastman, Stan Sakai; inks: Kevin Eastman; colors: Tomi Varga | Donatello, Leonardo, Michelangelo, Miyamoto Usagi, Raphael |
| 29 | - | illustration | 1 | pencils: Stan Sakai; inks: Stan Sakai | Donatello, Leonardo, Michelangelo, Miyamoto Usagi, Raphael |
| 30 | - | cover reprint (on interior page) | 1 | pencils: Stan Sakai; inks: Stan Sakai; colors: Tom Luth | Donatello, Leonardo, Michelangelo, Miyamoto Usagi, Raphael |
| 31 | - | illustration | 1 | pencils: Stan Sakai | |
| 32 | - | cover reprint (on interior page) | 1 | pencils: Stan Sakai; inks: Stan Sakai; colors: Tom Luth | Donatello, Leonardo, Michelangelo, Miyamoto Usagi, Raphael |
| 33 | - | illustration | 1 | pencils: Stan Sakai | Donatello, Leonardo, Michelangelo, Miyamoto Usagi, Raphael |
| 34 | - | cover reprint (on interior page) | 1 | pencils: Stan Sakai; inks: Stan Sakai; colors: Stan Sakai | Donatello, Leonardo, Michelangelo, Miyamoto Usagi, Raphael |
| 35 | - | illustration | 1 | pencils: Stan Sakai | Donatello, Leonardo, Michelangelo, Miyamoto Usagi, Raphael |
| 36 | - | cover | 1 | pencils: Stan Sakai; inks: Stan Sakai; colors: Stan Sakai | Donatello, Leonardo, Michelangelo, Miyamoto Usagi, Raphael |
| 37 | - | illustration | 1 | pencils: Stan Sakai; inks: Stan Sakai; colors: Stan Sakai | Leonardo, Miyamoto Usagi |
| 38 | - | illustration | 1 | pencils: Ciro Nieli; inks: Ciro Nieli; colors: Ciro Nieli | Leonardo, Miyamoto Usagi |
| 39 | - | illustration | 1 | pencils: Stan Sakai; inks: Stan Sakai | Donatello, Leonardo, Michelangelo, Miyamoto Usagi, Raphael |
| 40 | - | illustration | 1 | pencils: Stan Sakai; inks: Stan Sakai | Leonardo, Miyamoto Usagi |
| 41 | - | illustration | 1 | pencils: Stan Sakai; inks: Stan Sakai | Donatello, Miyamoto Usagi |
| 42 | - | illustration | 1 | pencils: Stan Sakai; inks: Stan Sakai | Leonardo, Miyamoto Usagi |
| 43 | - | illustration | 1 | pencils: Stan Sakai; inks: Stan Sakai | Leonardo, Miyamoto Usagi |
| 44 | - | illustration | 1 | pencils: Stan Sakai; inks: Stan Sakai | Leonardo, Miyamoto Usagi |
| 45 | - | illustration | 1 | pencils: Stan Sakai; inks: Stan Sakai | Leonardo |
| 46 | - | illustration | 1 | pencils: Stan Sakai; inks: Stan Sakai | Leonardo, Miyamoto Usagi |
| 47 | - | illustration | 1 | pencils: Stan Sakai; inks: Stan Sakai | Donatello, Leonardo, Michelangelo, Miyamoto Usagi, Raphael |
| 48 | - | illustration | 1 | pencils: Stan Sakai; inks: Stan Sakai | Leonardo, Miyamoto Usagi |
| 49 | - | illustration | 1 | pencils: Stan Sakai; inks: Stan Sakai | Donatello, Leonardo, Michelangelo, Miyamoto Usagi, Raphael |
| 50 | - | illustration | 1 | pencils: Stan Sakai; inks: Stan Sakai | Donatello, Leonardo, Michelangelo, Miyamoto Usagi, Raphael |
| 51 | - | illustration | 1 | pencils: Stan Sakai; inks: Stan Sakai | Leonardo, Miyamoto Usagi |
| 52 | - | illustration | 1 | pencils: Stan Sakai; inks: Stan Sakai | Miyamoto Usagi |
| 53 | - | illustration | 1 | pencils: Stan Sakai; inks: Stan Sakai | Miyamoto Usagi |